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For the 2025 school year, there are 2 public charter schools serving 319 students in San Marcos, CA.

The top ranked public charter schools in San Marcos, CA are Baypoint Preparatory Academy - San Diego and Pivot Charter School - San Diego Ii. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

San Marcos, CA public charter schools have an average math proficiency score of 36% (versus the California public charter school average of 32%), and reading proficiency score of 53% (versus the 48% statewide average). Charter schools in San Marcos have an average ranking of 7/10, which is in the top 50% of California public charter schools.

Minority enrollment is 75% of the student body (majority Hispanic), which is equal to the California public charter school average of 75% (majority Hispanic).