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For the 2025-26 school year, there are 3 public schools serving 811 students in Scott City, MO (there are , serving 70 private students). 92% of all K-12 students in Scott City, MO are educated in public schools (compared to the MO state average of 88%).

The top-ranked public schools in Scott City, MO are Scott City High School, Scott City Middle School and Scott City Elementary School. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

Scott City, MO public schools have an average math proficiency score of 36% (versus the Missouri public school average of 40%), and reading proficiency score of 44% (versus the 43% statewide average). Schools in Scott City have an average ranking of 5/10, which is in the bottom 50% of Missouri public schools.

Minority enrollment is 9% of the student body (majority Hispanic), which is less than the Missouri public school average of 32% (majority Black).