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For the 2025-26 school year, there are 3 public schools serving 524 students in Milton, NH (there are , serving 24 private students). 96% of all K-12 students in Milton, NH are educated in public schools (compared to the NH state average of 84%).

The top-ranked public schools in Milton, NH are Nute High School, Milton Elementary School and Nute Junior High School. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

Milton, NH public schools have an average math proficiency score of 20% (versus the New Hampshire public school average of 42%), and reading proficiency score of 26% (versus the 51% statewide average). Schools in Milton have an average ranking of 1/10, which is in the bottom 50% of New Hampshire public schools.

Minority enrollment is 6% of the student body (majority Hispanic and Black), which is less than the New Hampshire public school average of 18% (majority Hispanic).